Wiki keys on mobile devices

The development of increasingly powerful mobile devices like PDAs (Personal Digital Assistants) and Smartphones, with larger displays and greater resolution makes them increasingly suitable for identification tools available directly “in the field”. One of several approaches towards this aim in the KeyToNature project is based on wiki-stored documents. Important features of wiki-based keys, such as hidden text and media information as well as links to glossary entries are supported. The illustrated keys can be used online or downloaded in a zip file. An extension to support the application stores of various mobile platforms (Android, Apple iPhones, etc.) is under development

Simple matrix keys from Excel spreadsheets

An innovative workflow is presented, leading from a simple character and taxon matrix, prepared in an Excel spreadsheet, to a functioning free-access matrix key, stored in SDD (Structured Descriptive Data) format and presented in the flash-based free-access key player IBIS-ID directly on the web. The subset of matrix key functionality supported by this workflow include categorical and quantitative characters, multiple character states for a given taxon, taxon, character, and state illustrations, and a single character grouping level. Advanced features such as complex character or taxon trees, character dependency, or taxon-specific state images are not supported. The workflow aims to attract new contributors for which the learning curve of special purpose matrix-key editing software is too steep

Types of identification keys

A number of terms related to identification tools are introduced and the advantages of selected types of identification keys are compared

Collaborative platforms for streamlining workflows in Open Science

Despite the internet’s dynamic and collaborative nature, scientists continue to produce grant proposals, lab notebooks, data files, conclusions etc. that stay in static formats or are not published online and therefore not always easily accessible to the interested public. Because of limited adoption of tools that seamlessly integrate all aspects of a research project (conception, data generation, data evaluation, peer-reviewing and publishing of conclusions), much effort is later spent on reproducing or reformatting individual entities before they can be repurposed independently or as parts of articles.

We propose that workflows - performed both individually and collaboratively - could potentially become more efficient if all steps of the research cycle were coherently represented online and the underlying data were formatted, annotated and licensed for reuse. Such a system would accelerate the process of taking projects from conception to publication stages and allow for continuous updating of the data sets and their interpretation as well as their integration into other independent projects.

A major advantage of such workflows is the increased transparency, both with respect to the scientific process as to the contribution of each participant. The latter point is important from a perspective of motivation, as it enables the allocation of reputation, which creates incentives for scientists to contribute to projects. Such workflow platforms offering possibilities to fine-tune the accessibility of their content could gradually pave the path from the current static mode of research presentation into
a more coherent practice of open science

Wikis in scholarly publishing

Scientific research is a process concerned with the creation, collective accumulation, contextualization, updating and maintenance of knowledge. Wikis provide an environment that allows to collectively accumulate, contextualize, update and maintain knowledge in a coherent and transparent fashion. Here, we examine the potential of wikis as platforms for scholarly publishing. In the hope to stimulate further discussion, the article itself was drafted on "Species-ID":http://species-id.net/w/index.php?title=Wikis_in_scholarly_publishing&oldid=3815 - a wiki that hosts a prototype for wiki-based scholarly publishing - where it can be updated, expanded or otherwise improved

A search tool for the digital biodiversity resources of KeyToNature

The European KeyToNature project has created a framework to gather large amounts of biodiversity-related digital data and metadata from cooperating providers and to make them publicly available via an advanced search engine tool. The novelty of the solution consists in the creation of specific queries for the search web service in the KeyToNature digital repository, in the implementation of a communication protocol between the client application and the repository server, and in other original solutions for metadata presentation

A statement by Scientists for Future concerning the protests for more climate protection

In March 2019, German-speaking scientists and scholars calling themselves Scientists for Future, published a statement in support of the youth protesters in Germany, Austria, and Switzerland (Fridays for Future, Klimastreik/Climate Strike), verifying the scientific evidence that the youth protestors refer to. In this article, they provide the full text of the statement, including the list of supporting facts (in both English and German) as well as an analysis of the results and impacts of the statement. Furthermore, they reflect on the challenges for scientists and scholars who feel a dual responsibility: on the one hand, to remain independent and politically neutral, and, on the other hand, to inform and warn societies of the dangers that lie ahead

Community next steps for making globally unique identifiers work for biocollections data

Biodiversity data is being digitized and made available online at a rapidly increasing rate but current practices typically do not preserve linkages between these data, which impedes interoperation, provenance tracking, and assembly of larger datasets. For data associated with biocollections, the biodiversity community has long recognized that an essential part of establishing and preserving linkages is to apply globally unique identifiers at the point when data are generated in the field and to persist these identifiers downstream, but this is seldom implemented in practice. There has neither been coalescence towards one single identifier solution (as in some other domains), nor even a set of recommended best practices and standards to support multiple identifier schemes sharing consistent responses. In order to further progress towards a broader community consensus, a group of biocollections and informatics experts assembled in Stockholm in October 2014 to discuss community next steps to overcome current roadblocks. The workshop participants divided into four groups focusing on: identifier practice in current field biocollections; identifier application for legacy biocollections; identifiers as applied to biodiversity data records as they are published and made available in semantically marked-up publications; and cross-cutting identifier solutions that bridge across these domains. The main outcome was consensus on key issues, including recognition of differences between legacy and new biocollections processes, the need for identifier metadata profiles that can report information on identifier persistence missions, and the unambiguous indication of the type of object associated with the identifier. Current identifier characteristics are also summarized, and an overview of available schemes and practices is provided

A MediaWiki implementation of single-access keys

Design principles, features, and data exchange options of an open source implementation of single access keys for the collaborative MediaWiki platform are presented